Genomic Location: LJWW01000168.1:95756...109403
NR annotation: KXJ17673.1, putative ATP-dependent RNA helicase TDRD12 [Exaiptasia diaphana]
| CDS | |||||
| KXJ17673.1 | |||||
| Transcript |
| - |
| Protein |
| KXJ17673.1 |
| Uniprot term | Description |
|---|---|
| Q587J7 | Putative ATP-dependent RNA helicase TDRD12 OS=Homo sapiens OX=9606 GN=TDRD12 PE=1 SV=2 |
| Q9CWU0 | Putative ATP-dependent RNA helicase TDRD12 OS=Mus musculus OX=10090 GN=Tdrd12 PE=1 SV=2 |
| Q5GUR8 | ATP-dependent RNA helicase RhlB OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) OX=291331 GN=rhlB PE=3 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00565 | SNase | Staphylococcal nuclease homologue | Domain | Interproscan |
| PF00567 | TUDOR | Tudor domain | Domain | Interproscan |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000225 | Repeat | Armadillo | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR035437 | Homologous_superfamily | SNase-like, OB-fold superfamily | Interproscan |
| IPR008978 | Homologous_superfamily | HSP20-like chaperone | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR016071 | Domain | Staphylococcal nuclease (SNase-like), OB-fold | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR002999 | Domain | Tudor domain | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22655 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0042078 | Biological Process | germ-line stem cell division | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K18409 | TDRD12; ATP-dependent RNA helicase TDRD12 | EC:5.6.2.5 | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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