Gene detail

Detailed information of KXJ19160.1 in Exaiptasia diaphana

Genomic Location: LJWW01000136.1:25169...38316
NR annotation: KXJ19160.1, Receptor-type tyrosine-protein phosphatase F [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ19160.1

ATGCAGTCTCCTTCAGGTTCTTTCATAACCAGAAGCAAAACCAAGCGTATCTGCAACGACAACATCATCAAAAAGCATTGTCGTAACATGGCAGCCCCTGATTGTTCTCCAAAACTGAAATCAACTGAACCCTTGTCTTCCACAAGTATCCGAGTGACATGGGACCCACTGCCAAATACCAATTGCAGAAATGGAGTTCTGAGACTCTACAAAGTCTTATATAGGAGACATGGTGTCCGTAATGCACAAATAGCCTATACTGCTGATGATGTCCATTCAATGGTGATAACAGATCTTCAGAAGTATACAACATACATTTTCTCAGTAGTCGCTCGTACTGTGAAAGACAGTGAGTTAAGTAATGCAATAAGCAGAAGGACAAAACAAGATGCCCCCGATTGCCCTCCAAAACTTAAATCAGTCAAGGCCCTGTCTTCGACAAGTATCCGAGTGACATGGCACCCGCTGCCAAATACCACTTGCAGGAATGGAATTCTGAGAGGCTACAAAGTCTTATACAGGAGGCCTGGTGCCCGTAGTTCACAAAAGGACTTTACTGGTGCTGATGTCAATTCAATGGTGATAAAGGGTCTTCAGAAGTATACAACATACGTGTTCTCAGTAGTCGCATATACTGTCAAAGACAGTGAGCCAAGTAACGCAATAAGCAGAAGGACAAAGCAAGATGCCCCCGATTGCCCTCCAAACCTTAAATCAGTCAAGGCCCTTTCTTCGACGAGTATCCGATTGACATGGGACCCACCGCCAAATACTACTTGCAGGAATGGAATTCTGAGAGGCTACAAAGTCTTATACAGGAGCCCTGGTGCCCGTAGTTCACAAATGGACGTTACTGGTGCTGATGTCAATTCAATGGTGATAAAGGGTCTTCAGAAGTATACATTATACGTGTTCTCAGTAGTCGCATATACTGTAAATAACAGTAAGCCAAGTAATGCAATAAGCAGCAGGACATTACAAGATGCCCCCGATTGCCCTCCAAACCTTAAATCAGTCAAGGCCCTGTCTTCGACAGGTATCCGATTGACATGGGACCCACCGCCAAATACCACTTGCAGGAATGGAATTCTGAGAGGCTACAAAGTTTTATACAAGAGCCCTGGTGCCCGTAGTTCACAAATGGACGTWACTGGTKCTGATGTCAATTCAATGGTGATRAAGGGTCTTCAGAAGTATACAACATACGTGTTCTCAGTAGTCGCATATACTGTAAATAACAGTAAGCCAAGTAATGCAATAAGCAGCAGGACACTTCAAGATGGCCCCGATTGTGATCCAAAGCTGAAATCAGTCAAGGCCATGACTTCGACAAGTATCCAAGTGACATGGGAGCCACTGCCAAATACCACTTGCAGGAATGGAATTCTGAAAGGCTACAAAGTATTATACAAGAGATATGGCTTCCGTAATACAACAACCGCCAATATTGGTCCTGATGTCCATTCAATGGTGATAAGAGATCTTCATAAGTACACAACGTACATAATCAACGTTGTTGCATATACTATCAAAGACAGTAAACCAAGTAACGCGATAAATAGAAGGACACTTCAAGATGCTCCCTCTGTACCCCTTAACGACAAAGCGAAACTAATCCAACCTAAAGACGACTTTCATATACCACGTGTACAAGTCACGTGGGATAAACCATTACATGATAATGGCATCATCACAAGATACACACTTGTGTATCGCTATGATAACGATACATCCAATTATGTAAATATAACTGATATATCGTCGTTGGTATATACACTTGGTGTACTTGGTCAAGCATGGTTTTGGTTTAAGATAAGCGCGAGTACGATCAAAGAAGGACCTTATACTGCTATCAATAGCCTTTGGATCCCTGCCTATGAGGAACAGACAAGAAGAAGAGAAAGAGAGCGTCGAAGAAGTCTAAGTGAAGAACAACGCAGGCTTGAAAGGGAGAGAAAACGTGATAGACGAAACAATTTAATAAAGACTCAAGCAAATCGAGAAACAAGTGAACGCCAAAGACAACGATTATTGAGGGAGAATTTCTCATAG

Transcript

Protein

Uniprot

Uniprot term	Description
A2A8L5	Receptor-type tyrosine-protein phosphatase F OS=Mus musculus OX=10090 GN=Ptprf PE=1 SV=1
Q64604	Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1
A7MBJ4	Receptor-type tyrosine-protein phosphatase F OS=Bos taurus OX=9913 GN=PTPRF PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44170	PROTEIN SIDEKICK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan