Detailed information of KXJ19663.1 in Exaiptasia diaphana

Genomic Location: LJWW01000126.1:91328...102426
NR annotation: KXJ19663.1, DNA-directed RNA polymerase, mitochondrial [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BKF1DNA-directed RNA polymerase, mitochondrial OS=Mus musculus OX=10090 GN=Polrmt PE=1 SV=1
O00411DNA-directed RNA polymerase, mitochondrial OS=Homo sapiens OX=9606 GN=POLRMT PE=1 SV=2
O24600DNA-directed RNA polymerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPOT3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00940RNA_polDNA-dependent RNA polymeraseFamilyInterproscan
PF14700RPOL_NDNA-directed RNA polymerase N-terminalDomainInterproscan
PF13812PPR_3Pentatricopeptide repeat domainRepeatInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029262DomainDNA-directed RNA polymerase, N-terminalInterproscan
IPR046950DomainDNA-directed RNA polymerase, C-terminal domain, phage-typeInterproscan
IPR002885RepeatPentatricopeptide repeatInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR002092FamilyDNA-directed RNA polymerase, phage-typeInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR037159Homologous_superfamilyDNA-directed RNA polymerase, N-terminal domain superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0001018Molecular Functionmitochondrial promoter sequence-specific DNA bindingInterproscan
GO:0006390Biological Processmitochondrial transcriptionInterproscan
GO:0034245Cellular Componentmitochondrial DNA-directed RNA polymerase complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10908POLRMT, RPO41; DNA-directed RNA polymerase, mitochondrialEC:2.7.7.6
Mitochondrial biogenesisko03029deepkoala

TOP