Gene detail

Detailed information of KXJ21285.1 in Exaiptasia diaphana

Genomic Location: LJWW01000098.1:70746...78918
NR annotation: KXJ21285.1, Ubiquitin carboxyl-terminal hydrolase 38 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ21285.1

ATGGACCAGATACTAAAGGGAATAGTTGCGTCGGACCATCCCGAATCCGTCAAAAAATCATTAATTCAACAGCTTGTTTCTAAGGCAGCCAACGAAATCCCGGAAGAACAATGTGTGTCTATTTTCGAGATGAGCTCACTATGGATGTCTGATGGAAATTCAGAGTTTCTCAGTGACAGCGGAAAACTTGTTCTCTCTTCTTGGGGAAAACACCATAGAGATGTCTTTCAAAGATTTTTTACAGAGGATTATTTGGTGCGTTTTCTAGATGACGCTGACAAATTGACGATCGGGTCGGTGAACTACGTGAGGACTGCATTTGATTTACTACAACACACTCCACAAATTTTTTCTCTCTACACAATTATTCGCCATCGTGCTACTTCATGGATCAATATTAAAGCAGACATTGACTTCAGTGCTGCTGTGTGTCGCCTACTGATTGATTACAACCATTGCTGGCCTGTAGGAGACCATTTAATTCAGACATGCTTCGCTTTGGTCAACTGCTTGAGCAAAACAGAACTTCCCAAATCCTCAAAACAGGAGCTCAAAAGCTGTATCCGAAATGCCGGTACGATAGCAGCTTTGCTCAACCGTATATGGACCAAGAATCAGAATTTTATTTTTACCGTTTTAACGGAGTTATTCAAGATTATTTCAGCCCCAGGACCTAATCCCTCTGTTGCTCTGGGTTCAATCGCACAATTTTTTTCCCCTGAAGTTATCGATACAGCAACTAATATGGTAGCGAGGAGTCCTACGGTGTCAGATGATAATCTTTCATTAGCTCTGTCTCGTATGATTAGCTGGCTTTCATGGCCAGGCGGCAAGCGAGTCGACCAATGGATAATATGCTTTTTAAGGGCATTAGCCATAGCGGGAAAGCATTCTATATTAATACAAGTAACATTGGAGAAACTTCCTCAGGTTTTCAGTCGTTTGTTGTTTCCAATGGTCAGAGAGAGTACAATGGCTGTGTTATCACATATGCTACTAAGTTTCCAGCACTCGCCACAGGCATTCCATCTGATTGTGGAACATGTGCCTGACCTGGTGAAGACYCTCAAGAAAGAGGACAGTGTTTCTTCACAGTCTTGTCTTCAGACATTAACTGAACTGGTTCACTGTTTAATGTATCGACACTCAGGTTTCCCTGAATTGTATGGACCAGTCTTGGATTGTCTACAGGACTTTCATAAACCATCAGAAGCAATGATCAAGAAATGGCTGACACAAACAGCATGGGCAGCTCAAGCCATTCACATGAACTTAGCTAGAGTGACTCCCAAATCAGAAACAGGACGAACTGGACTTGTGAACCTTGGCAATACATGTTACATGAACAGCATAATACAGGCATTATACATGCTAGATGACTGTGTGGTCGATCCTTGTGGGACAGTGGTTAACACATCATACAAGTATACCAAGACTGTGGGAGCAACAGTGAATGCAAGAGAAAAAGATGGTTTAACTCCACTACACCTTGCTGTCTATCATGGATATGCAAAGTGTGTAAAAATATTGATTGAATACGGAGCAGATGTTAACAGTACTTCCAGATTTGGAAGTACACCTTTGCATCAAGCTGCTTACTTTGGTCACCTGACATGCGCCCAGGTATTGCTACAGAATGGTGCTTTAGTCGGTGTCGAGGAAGCCTGGGGACAAACCCCATTGTATTTAGCAGCACAGAGGGCACATAGTAATGTTATTCAACTATTATTGGAATATAATGCATCGGTGATACAAACAGATAAAGCGCATTATAAGACTGCACTCCATGTTGCATGCGAAGCTCAGAGTATTGCATGTGTGCAGTTCTTACTGGATGCTGGTGCTAGTCCCAATGTACAGTGCAGCAGCGGTAGGACACCTATGCATGAAGTTGTAACTGGCGAAGAAGTAGAAGCACTTTCATATTTATTGATAGAGTACGGAGCAAGATGTGACATACAAGATCAGAACGAGTGCTCTGCCATTAACTGTCTGGAAGGCTTAGTGCTTAGGTATTCAAATTCTTCAAACATTGAACAGTACAACAAATACCAAAAGTTACTTGGATACATCCACAAAACCCAAGGTCAACCCAAAACATTGATGCAAATGTGTCGTATTGAACTTCGGCGTCATCTTTCACCTTCAAATTTATACATAGTGACAGAGCTTGACATCCCAGAACGTCTTAAGAACTATATTTTATACATTGTTCATGACAAGTCAGTATCCTGA

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q8NB14	Ubiquitin carboxyl-terminal hydrolase 38 OS=Homo sapiens OX=9606 GN=USP38 PE=1 SV=2
Q8BW70	Ubiquitin carboxyl-terminal hydrolase 38 OS=Mus musculus OX=10090 GN=Usp38 PE=1 SV=2
Q9P2H5	Ubiquitin carboxyl-terminal hydrolase 35 OS=Homo sapiens OX=9606 GN=USP35 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|SOCS
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF21246	Usp38-like_N	Ubiquitin carboxyl-terminal hydrolase 38-like, N-terminal domain	Domain	Interproscan
PF07525	SOCS_box	SOCS box	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001496	Domain	SOCS box domain	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR049407	Domain	Ubiquitin carboxyl-terminal hydrolase 38-like, N-terminal domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR036036	Homologous_superfamily	SOCS box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24203	ANKYRIN REPEAT FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan