Gene detail

Detailed information of KXJ25111.1 in Exaiptasia diaphana

Genomic Location: LJWW01000045.1:817879...825742
NR annotation: KXJ25111.1, Transcription initiation factor TFIID subunit 2, partial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ25111.1

TCTGATGCATGGTTGTGTTCAGGGATATCAGGATATCTTTATAGTTTGTTTGTGAAGAAGGTTTTTGGAAATAATGAATATAGACATTGGATCATGAAGGAGAATGAGTGTGTATGTAAGTATGAGATGGAAGGACCAGGTCTCCCTCCACTTCACAGCCCTCTAGGTACCAGCTCAGCATCAACCAGTTCTTCATTAACTTCTCCTCCTATCGTACCATCATCAACACCATTCTCAGCCATCCATCTCCATCCTCATCTGATTGGCGTGAAACAGAAGGAAGTCGCCTGGAGTAAGGCTCACCTAGTTATTAGAATGATTGAGAATCGTATAGGACAAGAACCTTTGCTTCAGAGCGGATTTCGTATGAGTGGGAAACGGACGGTACTGTACTGTGACCGTAATCGTACTGTTTTCAACAAGCTTCTGTCTCTAGCAAACACTACTGCACAACCTAAAGTCGACCCAAGCTTATGGAAGAATTTACTGCTATCTACCACAGGGTTTCTTAAGTCAATATCAACTGTGTCTGGAAAAGATATTAATGTATTTATCGACCAGTGGATATGCCACAGTGGCATAGCTAAATTTCATGGCAGCTTCGTCTTCAATCGCAAAAGGAATATTGTAGAGCTGGACATCAAGCAAGATTTATCACGTGGTACAACTAAATATGTGGGTCCACTTACTGTGTGTATACAAGAATTAGATGGATCGTTTAATCATACTGTACAGATAGAAGACATATCCAGTCGACACGAGCTGCCGTGTCACTCCAAAAGCAGAAGAAACAAAAAGAAGAAGATTCCGCTGATGACTGGCGAGGAAGTTGACATGAATCTCGATGCAATGGACTCTGATTCACCTGTTCTCTGGATGCGTATCGACCCAGAAGTCACGTGGCTCCGTCACGTGACGTTCGAGCAGCCTGATTACATGTGGCAGTACCAGCTACGTCATGAGCGTGACGTCATGGCACAAGCAAAAGCTCTTGAAGCACTTGATCGATTCCCATCTCCAGCGACTCGTGAAGCTTTGATTGACATCGTTGCCACATCGACCGCTGAAAGCTGGGCAGGTCATGCCGCTATGATGAACATCTTCAAAAACTTCTTTTCCTCAAAATCTTGTCCTCAGATTATTCGTTATAACGATTTCTCGAATTTTATATCTTATTTTATTCTCAAGACTCTCCCAGTTGCCATAGCATCTATACGTAATATCCATTCACAGTGTCCACGTGAAATTCTTCTATTTTTACTTGAGTTGTTGAAATATAACGATAATCGCATAAATAAGTATTCGGATGGTTACTACATTGCAGCATTGATTACTGCCTTAGCAAAGACAGTCACTGCTGGAGTATGTATGACTACAACCACAAGCACTGGAAAGCATGTTGTCAAATTGAAAGAAGACACGCAGGTTGTTTTAAGTGAGGTGACTCGACGTCTTAATGTCGAGAAATTGCTACCATCCTATCGATACGTCGTCACAGTCAGTTGCCTAAAGGCTTTAAGAACTCTTCAAGTCAACGGACAAGTTCCATCCGATCCAAAGACCTACGAATATTACTCAAGTTATGGTCATTTTGAAGATGTACGAAAATGTGCTGTTGAGTGTCTTGTCGACTTTGCCAAAGTGGAGCAAAGTGAACGAGTTCTTAGTTTTCTACTAACAATCGTTGAAAAAGACCCAGTTCCTTTTATCAGGCATTATACACTAAGATCATTAGCTGAAAACCCTCCCTTCACACGCAAAGCCGATTCACCTCTCTGCACCGAGAACATCGTCGAACGGTTGTGGCATATAATGAACACCGTTCACGACGCCCGTTTACGCTGTGATGCATCTGACCTGTATAACTCTATGTTCGGAAGGCTAACACCAACTTGTGTTCCACCACAGGGAATGGGCATCGTCATTGACCTGAAAAAAGAGAAAATTATGAGTCTCTCGCCGCTTGCCATGCCATCATCACCGGGTGGTTCTGTAAGTGRTGAAGAATCCACAGCATCGAAAACATCTAAGAAAAGTCACAAAAGAAAGCGTAAGACATCACGTCCACACTCGCCTACAGACAMCAGTCATTTAGACTCTCAACCTGGAACCCCATTGAGTGTGGAGTCTGCTTGCTCAGAAGGAAACAAGCTCAAATTGAAAATMAAGCTTGGAAACGACGAAAGTGGCGTTGAAAGCAGCGGGGAAGTCCATCCTAAGGACGCTGGAGAAAGTGAACCAAAAAAGCACAAAAAGAAGAAAAAGAAACACAGACATAAGGATGAAAAAGGRAAACGCAAAATGAGYACAAGCAGTAGTAAYTACGATTCTCCACTGATGTTCGACCCTAATGTCTCATCGACTCCTATTTGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q5ZIT8	Transcription initiation factor TFIID subunit 2 OS=Gallus gallus OX=9031 GN=TAF2 PE=2 SV=1
Q6P1X5	Transcription initiation factor TFIID subunit 2 OS=Homo sapiens OX=9606 GN=TAF2 PE=1 SV=3
Q8C176	Transcription initiation factor TFIID subunit 2 OS=Mus musculus OX=10090 GN=Taf2 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR037813	Family	Transcription initiation factor TFIID subunit 2	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR027268	Homologous_superfamily	Peptidase M4/M1, CTD superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15137	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005669	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006367	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan