Gene detail

Detailed information of KXJ26543.1 in Exaiptasia diaphana

Genomic Location: LJWW01000028.1:649628...663525
NR annotation: KXJ26543.1, Eukaryotic translation initiation factor 3 subunit D [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ26543.1

ATGGAGGGCAAAGCACATTTTGTTTCGCCCGAAATTCAAGATAATCCTGATGGATGGGGGCCTTGTAGTGTCCCTACAGCTTTCAAAGACATCCCATATCAACCATTTTCTAAAGGAGACCGAATAGGAAAGGTTTCTGATTGGACTGGCAACATTTATCAAGACAGACGTTATGCTAACAAATACCAATCTCAGTTTGGTGCTGGAAATCAGACTTTCTCATATTATCATGAAGAGGATGAAACCTCATTTCAGCTTGTTGACACGTCCCGACCTCAACGACCAGCTTACTTGAAGAACAGGAATAGGAGAGGAAGAAACAGAGACCAGAGAGGTGGTCGTTATGGGAACCAGCGATTTGACAATAATCAGTCTGGTGGTATGCAAAACTTGATGAGAGGGCGCGATAATCGCAATAAATTCCAGCGCAGAATGCAGAGGAACTATGGCGGTGGACGATGGGGAGACAGAAAACAGGGGCTGAAAGTTTCCGGCGAAAAGAAAGAACTAGCTCAGAGGTTAGAACCACTCGGAAAGTTCAAGGAGTTGTTTGATAAAAAAGTCACTCGAATTCAAGAAGATTTTAAGTTTTCTACTGCACTCGATCCCCATTCTATTCCACCTCTCTCAGCAAACTGGAAGGTCGTAGGGAAACAGACAGAAGTTGCAGTTCCGACTGTTACTGAATGTACGATTAAAGAATACCAGAAAGCGAAATACGCTGGAGGAAAAGGACAGTACAGAAAGGCTTATAAATTATTTTCTTCGAGAAGAATAATGTCGGTTAAAATAATTGAATGTTCTGGTGACACGTACGTGAAAGCTAGCATTCTTAAATCGTACACAGGGAGTATAAGCAGACCTGCAACACTTTTGTTTTGCAAAAATACTCCTGTGAAAGCATACTGTGGTTGTGCAGTGGGCAAAAGCGGATTATGTTGTCATGTTATAGCCCTTTTAATACAACTTAATCACTTCAATAATCACAAGAAACTATACCTTAATATGTCATGCACTGAAAAGCTACAAAAGTGGCATAAAAAGGGACAATCAAACACTGCAAGATCTGCTACTCAAGTGAAGTTAAAGTACATGAGAAATTTGCGTGGTGCTAGGAGAGACATCAATAAATTGAGGACAAAGAAAAAGGTCATCAGTGCTAGTGACAATGACTACAGTGACTGGTATACAAGAGATGTTTTGAAAATGGAAAAAAAAGTCAAGACTAAAATCAATTCAATGAAATCAGTTGAAAGTCATTTTCTTTCAGTCCTGTCCAAGTATAAAAAAAAATCAGGTTTATTTCTGCATTTAAGGTACAAGAATGAATTTCAAAACAAGGAAGCAGGGAGAGAGTATAATGAACTTGTATTGAAACCAAAGTTTGATGAGAGCACAGAGGCAGTATGGAGACCAAAACCAGCTGAGTCCGAAGCTAATACCTTTCCTACAGATACTGTTCAAGGTGATGAAGCTAAATTTAAACAACAAAATAGCCTCTTGACAAGATTGAATTATGTTCCTGTTGATCAGTGTTCTAAGGACTGGAGAGCTTTAAGAGTCGGGGTAATCACTGCTAGTAAAGCCCCATCATTACTTGGATTCCATGGGATGAAAGAATTTGATTGCTCTTGGTTTGCAATTAGAAATAAACTTGATGAAAGTGTACTGAACCCCAAAAGGTCTAGATTACCAAATTTCATTAGAGGTAAGCAAGAAGAAGGCAATGCACTCCTCCAGTTTTGTAATGATTCAAACCTAGACATTACCCAGTGTGGGTATTTTAAACATCCCACTGACCAGAGATTTGGGTCAAGTCCAGATGGAGTAAGCACTGGAGAACAGGAATTTCTAGTAGAAATCAAGACCCGATCCTTGCCAAATAAAAGTGATCTGGCAAAGCTAACACAAGAAAAAGTTGAAACAAAACTACTAACCACTCAAACTCCACTAACACAGATAACAGGAAGTCATTTAATACAATGCCATTTACAAATGGAGTGCACTGAAACATCACTTGTCTACTTGATGTCCTATGTTCCAGAAACCGAAGTTGCTGCTTATTTCCCTATAGCAAAAAATCATGTTCTGAGTGCGATAATGTTGGATTTATTAATACACATATTTGAAAAAAAAGCCATGTCTGACTCCTGGGCACATTTTGAGCATCCTAGCCTTGTAAAGCTAGGAAGTAAACTTGAAGGATCACACCCAACTTTTGAAAACACCCGCTATTTTAGATCTTGGAATCCCTGCGAAGCAAATCCATGTCTTAATGGTGGTAAGTGTGTAGCGGATSGAATCGACCTTCGCTGCGAGTGTAAAGGACATGTTGGTGAAAACTGCGAGATTTTAGATATCGTACCAAAGTCTTGCAGCGAGTTAAAGACGATGTTCCCCACAAAACCATCGGGTAACTACGTCATTGATCCCGATGGCCAATCAGAGCAGAAGCCATTTACTGTACACTGTGATATGACTGACAAGGGAGGGGTAGGTGTTACTGTTGTCAGTCATGATAGWGAGGCCAGGACTCTTGTTRACAACTGTAWKAATTGCATTCGAAATGTCGTCTACARTGTTACAATGGCACAGCTGGCAAAACTGACGCAAATATCCGCCCACTGCGAGCAGTTTATCAAATTTGAATGCAAAGATGACGTTTCGTTTGTGGCWGATGGYGACGCTTGGTGGGTGTCACGTGATGGTGTACGTCAGGAGTACTGGGGCGGGGCAACACCAGGAAGTGGTAAATGTGCCTGTGGTATGACCAACACTTGCGAAAATTCAAAAGGATGTAATTGTAACAATGTTGGAAGTTCAGGTAAAGGATCGTTTTCTGACAGCGGTCTGCTGACTGACAAGTCCACTCTACCCGTGACTCAGATGAGGTTCAGTGATACTGATCAAAGCCATGAACAAGTCGTTACATCAACTCCAACCGCTAGTCCAGTATCAATTGCTCTTTATTACGAGAGTCTTTGTCCAGGATGCAGAGCTTTTATCAAGWCTCAACTTTATCCTACGTACCGAAAGGTTGGGAAGATCATGGACATCATGCTAGTACCGTATGGMAATGCTGAGGAATCTAAAGACGGTGAGGAGTGGAAATTTAATTGTCAACATGGTCCAGCTGAATGTGTWGGAAATCTGATCGAAACCTGTGCGATATCACTTCTTGTTAATACATCCTCGTATTTTCCATTCATCCACTGTGTCGAGACCTCTATTGGACACAAGCCTGAAAGTACAGCAGAACAATGTGCCTCCCAACTTGGTATTGATTATGCACCCATTGAAAAGTGTGCAAGTGGACCGCAAGGRAACAAGTTGGAACATGAAATGGCCCTGAAGACAAATGCCCTGGAACCACCYCATCAATATGTGCCMTGGATTACCATGAATGGCAAACATACTAATAGAATACAAGACGAAGCTWCTTCAAATCTATTAAAACTTGTTTGTGATAACTACATGGGTACAAGACCTGCTGCTTGCCAAGAATCTGAACGACCATTTGCTAGCAAATGTTATAAGGATTTTTGA

Transcript

Protein

Uniprot

Uniprot term	Description
A7SMR1	Eukaryotic translation initiation factor 3 subunit D OS=Nematostella vectensis OX=45351 GN=v1g235689 PE=3 SV=1
E7E2N8	Gamma-interferon-inducible lysosomal thiol reductase OS=Carassius auratus OX=7957 GN=ifi30 PE=1 SV=1
Q5XJN2	Gamma-interferon-inducible lysosomal thiol reductase OS=Danio rerio OX=7955 GN=ifi30 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03227	GILT	Gamma interferon inducible lysosomal thiol reductase (GILT)	Family	Interproscan
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan
PF05091	eIF-3_zeta	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR004911	Family	Gamma interferon inducible lysosomal thiol reductase GILT	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR007783	Family	Eukaryotic translation initiation factor 3 subunit D	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13234	GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016671	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005852	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan