Detailed information of KXJ26600.1 in Exaiptasia diaphana

Genomic Location: LJWW01000028.1:490844...492092
NR annotation: KXJ26600.1, Pre-mRNA-splicing factor cwf2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P87126Pre-mRNA-splicing factor cwf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf2 PE=1 SV=2
Q5BB35Pre-mRNA-splicing factor cwc2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cwc2 PE=3 SV=1
Q4WU07Pre-mRNA-splicing factor cwc2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=cwc2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF16131TorusTorus domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034181DomainPre-mRNA-splicing factor Cwc2, RNA recognition motifInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR039171FamilyPre-mRNA-splicing factor Cwc2/Slt11Interproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR032297DomainTorus domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14089PRE-MRNA-SPLICING FACTOR RBM22Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0017070Molecular FunctionU6 snRNA bindingInterproscan
GO:0036002Molecular Functionpre-mRNA bindingInterproscan
GO:0071006Cellular ComponentU2-type catalytic step 1 spliceosomeInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27398CWC2; pre-mRNA-splicing factor CWC2-Spliceosomeko03041deepkoala

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