Detailed information of NP_001296640.2 in Hydra vulgaris

Genomic Location: NC_088932.1:35551945...35578843
NR annotation: NP_001296640.2, prelamin-A/C-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11048Lamin-A OS=Xenopus laevis OX=8355 GN=lmna PE=2 SV=1
P09010Lamin-B1.S OS=Xenopus laevis OX=8355 GN=lmnb1.S PE=2 SV=1
P48678Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00038FilamentIntermediate filament proteinCoiled-coilInterproscan
PF00932LTDLamin Tail DomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036415Homologous_superfamilyLamin tail domain superfamilyInterproscan
IPR039008DomainIntermediate filament, rod domainInterproscan
IPR001322DomainLamin tail domainInterproscan
IPR018039Conserved_siteIntermediate filament protein, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45721LAMIN DM0-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0005652Cellular Componentnuclear laminaInterproscan
GO:0006998Biological Processnuclear envelope organizationInterproscan
GO:0007097Biological Processnuclear migrationInterproscan
GO:0031507Biological Processheterochromatin formationInterproscan
GO:0051664Biological Processnuclear pore localizationInterproscan
GO:0090435Biological Processprotein localization to nuclear envelopeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07611LMNB; lamin B-Cytoskeleton proteinsko04812deepkoala

TOP