Gene detail

Detailed information of NY_Scal100_v1.22012.1 in Scolanthus callimorphus

Genomic Location: chr12:19217994...19219719
NR annotation: no NCBI-NR hit recorded
Species Scolanthus callimorphus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR002403 all species →	Family	Cytochrome P450, E-class, group IV	Interproscan
IPR050529 all species →	Family	Cytochrome P450, sterol 14-alpha demethylase	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24304 all species →	CYTOCHROME P450 FAMILY 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0006699 all species →	Biological Process	bile acid biosynthetic process	Interproscan
GO:0008395 all species →	Molecular Function	steroid hydroxylase activity	Interproscan
GO:0042632 all species →	Biological Process	cholesterol homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for NY_Scal100_v1.22012.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.