Gene detail

Detailed information of OS493_000029-T1 in Lophelia pertusa

Genomic Location: scaffold_1:331750...344792
NR annotation: KAJ7394227.1, ATPdependent RNA helicase [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q80Y44	Probable ATP-dependent RNA helicase DDX10 OS=Mus musculus OX=10090 GN=Ddx10 PE=1 SV=2
Q13206	Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens OX=9606 GN=DDX10 PE=1 SV=2
Q5ZJF6	Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus OX=9031 GN=DDX10 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014014	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan
IPR000629	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24031	RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan

Expression pattern