Gene detail

Detailed information of OS493_000224-T1 in Lophelia pertusa

Genomic Location: scaffold_1:2524153...2535516
NR annotation: KAJ7394415.1, hypothetical protein OS493_000224 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P29027	Chitinase 2 OS=Rhizopus oligosporus OX=4847 GN=CHI2 PE=1 SV=1
P49347	Concanavalin B OS=Canavalia ensiformis OX=3823 PE=1 SV=1
G1UH28	Acidic endochitinase Pun g 14, amyloplastic OS=Punica granatum OX=22663 GN=PSC PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00704	Glyco_hydro_18	Glycosyl hydrolases family 18	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR045321	Domain	Chitinase Cts1-like	Interproscan
IPR001223	Domain	Glycoside hydrolase family 18, catalytic domain	Interproscan
IPR050542	Family	Glycosyl Hydrolase 18 Family Chitinases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45708	ENDOCHITINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004568	Molecular Function	chitinase activity	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01183	E3.2.1.14; chitinase	EC:3.2.1.14	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala

Expression pattern