Gene detail

Detailed information of OS493_001232-T1 in Lophelia pertusa

Genomic Location: scaffold_2:6633883...6636311
NR annotation: KAJ7387883.1, SMC5-SMC6 complex localization factor protein 1 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR042479	Family	SMC5-SMC6 complex localization factor protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46677	SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0035861	Cellular Component	site of double-strand break	Interproscan
GO:1990166	Biological Process	protein localization to site of double-strand break	Interproscan
GO:2000781	Biological Process	positive regulation of double-strand break repair	Interproscan

Expression pattern

Expression trend for OS493_001232-T1 global co-expression network