Detailed information of OS493_001233-T1 in Lophelia pertusa

Genomic Location: scaffold_2:6642034...6652507
NR annotation: KAJ7387884.1, hypothetical protein OS493_001233, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12872Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens OX=9606 GN=SFSWAP PE=1 SV=3
D3ZTQ1Splicing factor, suppressor of white-apricot homolog OS=Rattus norvegicus OX=10116 GN=Sfswap PE=1 SV=1
Q3USH5Splicing factor, suppressor of white-apricot homolog OS=Mus musculus OX=10090 GN=Sfswap PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01805SurpSurp moduleFamilyInterproscan
PF09750DRY_EERYAlternative splicing regulator DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040397FamilySuppressor of white apricotInterproscan
IPR000061DomainSWAP/SurpInterproscan
IPR019147DomainSuppressor of white apricot, N-terminal domainInterproscan
IPR035967Homologous_superfamilySWAP/Surp superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13161SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000395Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

Expression pattern
 Expression trend for OS493_001233-T1 global co-expression network
TOP