Detailed information of OS493_001956-T1 in Lophelia pertusa

Genomic Location: scaffold_4:3285654...3300672
NR annotation: KAJ7375212.1, hypothetical protein OS493_001956 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHM6Catenin alpha-1 OS=Bos taurus OX=9913 GN=CTNNA1 PE=2 SV=1
P35221Catenin alpha-1 OS=Homo sapiens OX=9606 GN=CTNNA1 PE=1 SV=1
P26231Catenin alpha-1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01044VinculinVinculin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR006077FamilyVinculin/alpha-cateninInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18914ALPHA CATENINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

Expression pattern
 Expression trend for OS493_001956-T1 global co-expression network
TOP