Detailed information of OS493_003196-T1 in Lophelia pertusa

Genomic Location: scaffold_6:6176781...6182674
NR annotation: KAJ7340448.1, hypothetical protein OS493_003196 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W0T1Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster OX=7227 GN=E(bx) PE=1 SV=2
Q12830Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens OX=9606 GN=BPTF PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02791DDTDDT domainFamilyInterproscan
PF15612WHIM1WSTF, HB1, Itc1p, MBD9 motif 1MotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038028FamilyNucleosome-remodeling factor subunit BPTFInterproscan
IPR018501DomainDDT domainInterproscan
IPR028942DomainWHIM1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45975NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTFInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016589Cellular ComponentNURF complexInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan

Expression pattern
 Expression trend for OS493_003196-T1 global co-expression network
TOP