Detailed information of OS493_003681-T1 in Lophelia pertusa

Genomic Location: scaffold_7:4714814...4729491
NR annotation: KAJ7394009.1, Paired amphipathic helix protein Sin3a [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96ST3Paired amphipathic helix protein Sin3a OS=Homo sapiens OX=9606 GN=SIN3A PE=1 SV=2
Q60520Paired amphipathic helix protein Sin3a OS=Mus musculus OX=10090 GN=Sin3a PE=1 SV=3
Q62141Paired amphipathic helix protein Sin3b OS=Mus musculus OX=10090 GN=Sin3b PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08295Sin3_corepressSin3 family co-repressorDomainInterproscan
PF16879Sin3a_CC-terminal domain of Sin3a proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039774FamilyTranscriptional regulatory protein Sin3-likeInterproscan
IPR013194DomainHistone deacetylase interacting domainInterproscan
IPR031693DomainSin3, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12346SIN3B-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0016580Cellular Componentobsolete Sin3 complexInterproscan

Expression pattern
 Expression trend for OS493_003681-T1 global co-expression network
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