Detailed information of OS493_004673-T1 in Lophelia pertusa

Genomic Location: scaffold_9:3225624...3245027
NR annotation: KAJ7381075.1, biological adhesion [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
A2AX52Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
P12111Collagen alpha-3(VI) chain OS=Homo sapiens OX=9606 GN=COL6A3 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR002350DomainKazal domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_004673-T1 global co-expression network
TOP