Detailed information of OS493_006029-T1 in Lophelia pertusa

Genomic Location: scaffold_12:3835486...3843219
NR annotation: KAJ7339624.1, hypothetical protein OS493_006029 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WND5Elongator complex protein 1 OS=Oryctolagus cuniculus OX=9986 GN=ELP1 PE=2 SV=1
O95163Elongator complex protein 1 OS=Homo sapiens OX=9606 GN=ELP1 PE=1 SV=3
Q7TT37Elongator complex protein 1 OS=Mus musculus OX=10090 GN=Elp1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04762IKI3IKI3 familyRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006849FamilyElongator complex protein 1Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12747ELONGATOR COMPLEX PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0002926Biological ProcesstRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_006029-T1 global co-expression network
TOP