Detailed information of OS493_006173-T1 in Lophelia pertusa

Genomic Location: scaffold_13:715051...720690
NR annotation: KAJ7393205.1, hypothetical protein OS493_006173 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3V0T4Integrin alpha-D OS=Mus musculus OX=10090 GN=Itgad PE=1 SV=1
Q62507Cochlin OS=Mus musculus OX=10090 GN=Coch PE=1 SV=2
Q9QYE7Integrin alpha-D OS=Rattus norvegicus OX=10116 GN=Itgad PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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Expression pattern
 Expression trend for OS493_006173-T1 global co-expression network
TOP