Detailed information of OS493_006262-T1 in Lophelia pertusa

Genomic Location: scaffold_13:1519463...1524023
NR annotation: KAJ7393293.1, hypothetical protein OS493_006262 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
G1T469Nucleotide-binding oligomerization domain-containing protein 2 OS=Oryctolagus cuniculus OX=9986 GN=NOD2 PE=1 SV=2
Q9HC29Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NOD2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR050637FamilyNLRP family, innate immunity and inflammation regulatorsInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR038359Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45690NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

Expression pattern
 Expression trend for OS493_006262-T1 global co-expression network
TOP