Detailed information of OS493_007612-T1 in Lophelia pertusa

Genomic Location: scaffold_17:215445...243625
NR annotation: KAJ7364978.1, hypothetical protein OS493_007612 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0P5G1Tonsoku-like protein OS=Bos taurus OX=9913 GN=TONSL PE=2 SV=1
A9JR78Tonsoku-like protein OS=Danio rerio OX=7955 GN=tonsl PE=2 SV=1
D4A615Tonsoku-like protein OS=Rattus norvegicus OX=10116 GN=Tonsl PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR052311FamilyMMS22L-TONSL complex componentInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46358TONSOKU-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0043596Cellular Componentnuclear replication forkInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09257NFKBIL2; NF-kappa-B inhibitor-like protein 2-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_007612-T1 global co-expression network
TOP