Gene detail

Detailed information of OS493_007631-T1 in Lophelia pertusa

Genomic Location: scaffold_17:328988...356181
NR annotation: KAJ7364995.1, transcription corepressor [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O75081	Protein CBFA2T3 OS=Homo sapiens OX=9606 GN=CBFA2T3 PE=1 SV=2
Q61909	Protein CBFA2T1 OS=Mus musculus OX=10090 GN=Runx1t1 PE=2 SV=1
Q06455	Protein CBFA2T1 OS=Homo sapiens OX=9606 GN=RUNX1T1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07531	TAFH	NHR1 homology to TAF	Family	Interproscan
PF08788	NHR2	NHR2 domain like	Domain	Interproscan
PF01753	zf-MYND	MYND finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013289	Family	CBFA2T family	Interproscan
IPR037249	Homologous_superfamily	TAFH/NHR1 domain superfamily	Interproscan
IPR003894	Domain	TAFH/NHR1	Interproscan
IPR014896	Domain	NHR2-like	Interproscan
IPR002893	Domain	Zinc finger, MYND-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10379	MTG8 ETO EIGHT TWENTY ONE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10053	RUNX1T1, CBFA2T1; CBFA2/RNUX1 translocation partner 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Expression pattern