Detailed information of OS493_007687-T1 in Lophelia pertusa

Genomic Location: scaffold_17:1092879...1109352
NR annotation: KAJ7365045.1, FACT complex subunit SPT16 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y5B9FACT complex subunit SPT16 OS=Homo sapiens OX=9606 GN=SUPT16H PE=1 SV=1
Q920B9FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2
Q9W603FACT complex subunit SPT16 OS=Xenopus laevis OX=8355 GN=supt16h PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08512Rttp106-like_middleHistone chaperone Rttp106-like, middle domainDomainInterproscan
PF21091SPT16_CFACT complex subunit SPT16, C-terminal domainDomainInterproscan
PF08644SPT16FACT complex subunit (SPT16/CDC68)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013719DomainHistone chaperone RTT106/FACT complex subunit SPT16-like, middle domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR048969DomainFACT complex subunit SPT16, C-terminal domainInterproscan
IPR013953DomainFACT complex subunit Spt16 domainInterproscan
IPR040258FamilyFACT complex subunit Spt16Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13980CDC68 RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035101Cellular ComponentFACT complexInterproscan

Expression pattern
 Expression trend for OS493_007687-T1 global co-expression network
TOP