Detailed information of OS493_007848-T1 in Lophelia pertusa

Genomic Location: scaffold_17:3615660...3628007
NR annotation: KAJ7365197.1, hypothetical protein OS493_007848 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00047igImmunoglobulin domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF13676TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013098DomainImmunoglobulin I-setInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45889IG-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan

Expression pattern
 Expression trend for OS493_007848-T1 global co-expression network
TOP