Gene detail

Detailed information of OS493_007852-T1 in Lophelia pertusa

Genomic Location: scaffold_17:3749666...3754249
NR annotation: KAJ7365201.1, hypothetical protein OS493_007852 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6PDG5	SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2
Q8TAQ2	SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1
Q92922	SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16495	SWIRM-assoc_1	SWIRM-associated region 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032451	Domain	SMARCC, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12802	SWI/SNF COMPLEX-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0016514	Cellular Component	SWI/SNF complex	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan

Expression pattern