Detailed information of OS493_008690-T1 in Lophelia pertusa

Genomic Location: scaffold_20:3057679...3082502
NR annotation: KAJ7386553.1, Cytoplasmic dynein 1 heavy chain 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JHU4Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2
Q14204Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC1H1 PE=1 SV=5
P38650Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08393DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF12774AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan
PF08385DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR013602DomainDynein heavy chain, linkerInterproscan
IPR035699DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR042222Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR013594DomainDynein heavy chain, tailInterproscan
IPR042228Homologous_superfamilyDynein heavy chain, linker, subdomain 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46532MALE FERTILITY FACTOR KL5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10408DNAH; dynein axonemal heavy chain-Cytoskeleton proteinsko04812deepkoala

Expression pattern
 Expression trend for OS493_008690-T1 global co-expression network
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