Detailed information of OS493_008767-T1 in Lophelia pertusa

Genomic Location: scaffold_20:3895235...3901298
NR annotation: KAJ7386618.1, Serine palmitoyltransferase 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60HD1Serine palmitoyltransferase 1 OS=Macaca fascicularis OX=9541 GN=SPTLC1 PE=2 SV=1
Q5R9T5Serine palmitoyltransferase 1 OS=Pongo abelii OX=9601 GN=SPTLC1 PE=2 SV=1
O35704Serine palmitoyltransferase 1 OS=Mus musculus OX=10090 GN=Sptlc1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
----------

 InterPro
InterPro termTypeDescriptionSource
IPR050087Family8-amino-7-oxononanoate synthase class-IIInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13693CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004758Molecular Functionserine C-palmitoyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0046512Biological Processsphingosine biosynthetic processInterproscan
GO:0046513Biological Processceramide biosynthetic processInterproscan

Expression pattern
 Expression trend for OS493_008767-T1 global co-expression network
TOP