Detailed information of OS493_009290-T1 in Lophelia pertusa

Genomic Location: scaffold_22:1517325...1524290
NR annotation: KAJ7373962.1, AP-1 complex subunit beta-1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P52303AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1
Q08DS7AP-1 complex subunit beta-1 OS=Bos taurus OX=9913 GN=AP2B1 PE=2 SV=1
O35643AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02883Alpha_adaptinC2Adaptin C-terminal domainDomainInterproscan
PF09066B2-adapt-app_CBeta2-adaptin appendage, C-terminal sub-domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015151DomainBeta-adaptin appendage, C-terminal subdomainInterproscan
IPR013041Homologous_superfamilyClathrin adaptor, appendage, Ig-like subdomain superfamilyInterproscan
IPR013037Homologous_superfamilyClathrin adaptor, beta-adaptin, appendage, Ig-like subdomainInterproscan
IPR008152DomainClathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainInterproscan
IPR012295Homologous_superfamilyTBP domain superfamilyInterproscan
IPR026739FamilyAP complex subunit betaInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR009028Homologous_superfamilyCoatomer/calthrin adaptor appendage, C-terminal subdomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11134ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030131Cellular Componentclathrin adaptor complexInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan

Expression pattern
 Expression trend for OS493_009290-T1 global co-expression network
TOP