Detailed information of OS493_009549-T1 in Lophelia pertusa

Genomic Location: scaffold_23:97629...112000
NR annotation: KAJ7363397.1, hypothetical protein OS493_009549 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O19072Ornithine transcarbamylase, mitochondrial (Fragment) OS=Sus scrofa OX=9823 GN=OTC PE=2 SV=1
Q9YHY9Ornithine transcarbamylase, mitochondrial OS=Gallus gallus OX=9031 GN=OTC PE=1 SV=1
P11725Ornithine transcarbamylase, mitochondrial OS=Mus musculus OX=10090 GN=Otc PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00185OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF02729OTCace_NAspartate/ornithine carbamoyltransferase, carbamoyl-P binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036901Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR006130FamilyAspartate/ornithine carbamoyltransferaseInterproscan
IPR002292FamilyOrnithine/putrescine carbamoyltransferaseInterproscan
IPR006131DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR006132DomainAspartate/ornithine carbamoyltransferase, carbamoyl-P bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45753ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016597Molecular Functionamino acid bindingInterproscan
GO:0016743Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0004585Molecular Functionornithine carbamoyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0019240Biological Processcitrulline biosynthetic processInterproscan
GO:0042450Biological Processarginine biosynthetic process via ornithineInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00611OTC, argF, argI; ornithine carbamoyltransferaseEC:2.1.3.3
Arginine biosynthesisko00220deepkoala

Expression pattern
 Expression trend for OS493_009549-T1 global co-expression network
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