Detailed information of OS493_009592-T1 in Lophelia pertusa

Genomic Location: scaffold_23:574860...577871
NR annotation: KAJ7363438.1, LisH domain-containing protein armc9 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D2I5LisH domain-containing protein ARMC9 OS=Mus musculus OX=10090 GN=Armc9 PE=1 SV=1
A1A5P5LisH domain-containing protein ARMC9 OS=Rattus norvegicus OX=10116 GN=Armc9 PE=2 SV=1
Q5R629LisH domain-containing protein ARMC9 OS=Pongo abelii OX=9601 GN=ARMC9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21050ARMC9_ARMLisH domain-containing protein ARMC9, ARM repeatsRepeatInterproscan
PF21051ARMC9_LisHARMC9, LIS1 homology motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR048959DomainLisH domain-containing protein ARMC9, ARM repeat domainInterproscan
IPR040369FamilyLisH domain-containing protein ARMC9Interproscan
IPR048957Conserved_siteARMC9, LIS1 homology motifInterproscan
IPR006594Conserved_siteLIS1 homology motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14881LISH DOMAIN-CONTAINING PROTEIN ARMC9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0097542Cellular Componentciliary tipInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22864ARMC9; LisH domain-containing protein ARMC9-Cilium and associated proteinsko03037deepkoala

Expression pattern
 Expression trend for OS493_009592-T1 global co-expression network
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