Genomic Location: scaffold_25:136974...142053
NR annotation: KAJ7392572.1, hypothetical protein OS493_010219 [Desmophyllum pertusum]
| CDS |
| OS493_010219-T1 |
| Transcript |
| OS493_010219-T1 |
| Protein |
| OS493_010219-T1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00229 | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR021184 | Conserved_site | Tumour necrosis factor, conserved site | Interproscan |
| IPR006052 | Domain | Tumour necrosis factor domain | Interproscan |
| IPR008983 | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11471 | TUMOR NECROSIS FACTOR FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| Expression trend for OS493_010219-T1 global co-expression network |
