Detailed information of OS493_010644-T1 in Lophelia pertusa

Genomic Location: scaffold_26:1272138...1272308
NR annotation: KAJ7386244.1, tRNA ligase, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W1H4DNA ligase 1 OS=Drosophila melanogaster OX=7227 GN=DNAlig1 PE=1 SV=2
P51892DNA ligase 1 OS=Xenopus laevis OX=8355 GN=lig1 PE=2 SV=1
P37913DNA ligase 1 OS=Mus musculus OX=10090 GN=Lig1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:1903461Biological ProcessOkazaki fragment processing involved in mitotic DNA replicationInterproscan

Expression pattern
 Expression trend for OS493_010644-T1 global co-expression network
TOP