Detailed information of OS493_011344-T1 in Lophelia pertusa

Genomic Location: scaffold_28:3012993...3015263
NR annotation: KAJ7373735.1, hypothetical protein OS493_011344 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0C406Tryptophanase OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=tnaA PE=3 SV=1
Q2S1V4Tryptophanase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=tnaA PE=3 SV=1
O30971Tryptophanase OS=Rhodobacter capsulatus OX=1061 GN=tnaA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01212Beta_elim_lyaseBeta-eliminating lyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018176Conserved_siteTryptophanase, conserved siteInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR001597DomainAromatic amino acid beta-eliminating lyase/threonine aldolaseInterproscan
IPR011166FamilyBeta-eliminating lyase familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32325BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0009072Biological Processaromatic amino acid metabolic processInterproscan
GO:0016830Molecular Functioncarbon-carbon lyase activityInterproscan

Expression pattern
 Expression trend for OS493_011344-T1 global co-expression network
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