Detailed information of OS493_011380-T1 in Lophelia pertusa

Genomic Location: scaffold_28:3518617...3519615
NR annotation: KAJ7373771.1, hypothetical protein OS493_011380 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8QGQ6Circadian locomoter output cycles protein kaput OS=Gallus gallus OX=9031 GN=CLOCK PE=1 SV=2
O15516Circadian locomoter output cycles protein kaput OS=Homo sapiens OX=9606 GN=CLOCK PE=1 SV=1
Q5RAK8Circadian locomoter output cycles protein kaput OS=Pongo abelii OX=9601 GN=CLOCK PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14598PAS_11PAS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR047230FamilyCircadian locomoter output cycles protein kaput-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46055CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:1990513Cellular ComponentCLOCK-BMAL transcription complexInterproscan

Expression pattern
 Expression trend for OS493_011380-T1 global co-expression network
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