Detailed information of OS493_011839-T1 in Lophelia pertusa

Genomic Location: scaffold_30:2242596...2277723
NR annotation: KAJ7336620.1, hypothetical protein OS493_011839 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P42858Huntingtin OS=Homo sapiens OX=9606 GN=HTT PE=1 SV=2
P42859Huntingtin OS=Mus musculus OX=10090 GN=Htt PE=1 SV=2
P51111Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12372Htt_N-HEATHuntingtin, N-terminal HEATRepeatInterproscan
PF20927Htt_C-HEATHuntingtin, C-terminal HEATRepeatInterproscan
PF20925Htt_bridgeHuntingtin, bridgeRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR024613RepeatHuntingtin, N-terminal, HEAT repeats 2Interproscan
IPR048413RepeatHuntingtin, C-terminal HEAT repeatsInterproscan
IPR021133RepeatHEAT, type 2Interproscan
IPR028426FamilyHuntingtin familyInterproscan
IPR048412RepeatHuntingtin, bridgeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10170HUNTINGTON DISEASE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan

Expression pattern
 Expression trend for OS493_011839-T1 global co-expression network
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