Gene detail

Detailed information of OS493_012730-T1 in Lophelia pertusa

Genomic Location: scaffold_33:2449237...2451233
NR annotation: KAJ7379968.1, hypothetical protein OS493_012730 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
D3YXK2	Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2
O88453	Scaffold attachment factor B1 OS=Rattus norvegicus OX=10116 GN=Safb PE=1 SV=2
Q80YR5	Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR051738	Family	Scaffold Attachment Factor and Modulators	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15683	SCAFFOLD ATTACHMENT FACTOR B-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0050684	Biological Process	regulation of mRNA processing	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

Expression pattern