Detailed information of OS493_012782-T1 in Lophelia pertusa

Genomic Location: scaffold_33:2953213...2961985
NR annotation: KAJ7380020.1, hypothetical protein OS493_012782 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P31649Sodium- and chloride-dependent GABA transporter 2 OS=Mus musculus OX=10090 GN=Slc6a13 PE=1 SV=1
P31646Sodium- and chloride-dependent GABA transporter 2 OS=Rattus norvegicus OX=10116 GN=Slc6a13 PE=1 SV=1
Q00589Sodium- and chloride-dependent taurine transporter OS=Canis lupus familiaris OX=9615 GN=SLC6A6 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000175FamilySodium:neurotransmitter symporterInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

Expression pattern
 Expression trend for OS493_012782-T1 global co-expression network
TOP