Gene detail

Detailed information of OS493_013562-T1 in Lophelia pertusa

Genomic Location: scaffold_37:1390897...1393934
NR annotation: KAJ7392189.1, hypothetical protein OS493_013562 [Desmophyllum pertusum]

Gene Structure

Sequence

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR000225	Repeat	Armadillo	Interproscan
IPR028435	Family	Plakophilin/Delta catenin	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10372	PLAKOPHILLIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0007043	Biological Process	cell-cell junction assembly	Interproscan
GO:0045296	Molecular Function	cadherin binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08527	RARA, NR1B1; retinoic acid receptor alpha	-	Nuclear receptors	ko03310	deepkoala

Expression pattern