Detailed information of OS493_014203-T1 in Lophelia pertusa

Genomic Location: scaffold_40:464024...471456
NR annotation: KAJ7373057.1, hypothetical protein OS493_014203 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10881Lupus La protein homolog OS=Bos taurus OX=9913 GN=SSB PE=2 SV=2
P05455Lupus La protein OS=Homo sapiens OX=9606 GN=SSB PE=1 SV=2
P38656Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05383LaLa domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006630DomainLa-type HTH domainInterproscan
IPR002344FamilyLupus La proteinInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan

Expression pattern
 Expression trend for OS493_014203-T1 global co-expression network
TOP