Detailed information of OS493_014773-T1 in Lophelia pertusa

Genomic Location: scaffold_42:1379405...1397402
NR annotation: KAJ7334456.1, DNA (cytosine-5)-methyltransferase 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q27746DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus OX=7656 GN=DNMT PE=2 SV=1
Q92072DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus OX=9031 GN=DNMT1 PE=1 SV=1
Q24K09DNA (cytosine-5)-methyltransferase 1 OS=Bos taurus OX=9913 GN=DNMT1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12047DNMT1-RFDCytosine specific DNA methyltransferase replication foci domainDomainInterproscan
PF01426BAHBAH domainDomainInterproscan
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR022702DomainDNA (cytosine-5)-methyltransferase 1, replication foci domainInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR050390FamilyDNA Cytosine-5 MethyltransferaseInterproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10629CYTOSINE-SPECIFIC METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

Expression pattern
 Expression trend for OS493_014773-T1 global co-expression network
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