Detailed information of OS493_014831-T1 in Lophelia pertusa

Genomic Location: scaffold_42:1922885...1925983
NR annotation: KAJ7334509.1, P-TEFb-associated cyclin-dependent protein kinase Cdk9 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZKN1Cyclin-dependent kinase 9 OS=Gallus gallus OX=9031 GN=CDK9 PE=2 SV=1
Q6GLD8Cyclin-dependent kinase 9 OS=Xenopus tropicalis OX=8364 GN=cdk9 PE=2 SV=1
Q7SXE8Cyclin-dependent kinase 9 OS=Danio rerio OX=7955 GN=cdk9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00069PkinaseProtein kinase domainDomainInterproscan
PF12330Haspin_kinaseHaspin like kinase domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000719DomainProtein kinase domainInterproscan
IPR050108FamilyCyclin-dependent kinaseInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24056CELL DIVISION PROTEIN KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0000307Cellular Componentcyclin-dependent protein kinase holoenzyme complexInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008024Cellular Componentcyclin/CDK positive transcription elongation factor complexInterproscan
GO:0008353Molecular FunctionRNA polymerase II CTD heptapeptide repeat kinase activityInterproscan
GO:0030332Molecular Functioncyclin bindingInterproscan
GO:0032968Biological Processpositive regulation of transcription elongation by RNA polymerase IIInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02211CDK9; cyclin-dependent kinase 9EC:2.7.11.22
EC:2.7.11.23
Transcription machineryko03021deepkoala

Expression pattern
 Expression trend for OS493_014831-T1 global co-expression network
TOP