Gene detail

Detailed information of OS493_014964-T1 in Lophelia pertusa

Genomic Location: scaffold_43:1159024...1171992
NR annotation: KAJ7392026.1, C-type lectin (CTL) or carbohydrate-recognition domain (CRD) [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8C351	Layilin OS=Mus musculus OX=10090 GN=Layn PE=1 SV=4
Q6A051	Attractin-like protein 1 OS=Mus musculus OX=10090 GN=Atrnl1 PE=1 SV=2
Q5VV63	Attractin-like protein 1 OS=Homo sapiens OX=9606 GN=ATRNL1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051004	Family	Dendritic cell-specific ICAM-grabbing non-integrin domain-containing protein	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22802	C-TYPE LECTIN SUPERFAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0044419	Biological Process	biological process involved in interspecies interaction between organisms	Interproscan

Expression pattern

Expression trend for OS493_014964-T1 global co-expression network