Detailed information of OS493_015171-T1 in Lophelia pertusa

Genomic Location: scaffold_44:1673293...1677994
NR annotation: KAJ7385587.1, TATA box-binding protein-associated factor RNA polymerase I subunit B [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZJR9TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Gallus gallus OX=9031 GN=TAF1B PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20645Rrn7_cyclin_CRrn7/TAF1B, C-terminal cyclin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048538DomainRrn7/TAF1B, C-terminal cyclin domainInterproscan
IPR033599FamilyRNA polymerase I transcription initiation factor TAF1B/Rrn7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31576TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001164Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001188Biological ProcessRNA polymerase I preinitiation complex assemblyInterproscan
GO:0005668Cellular ComponentRNA polymerase transcription factor SL1 complexInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0042790Biological Processnucleolar large rRNA transcription by RNA polymerase IInterproscan
GO:0070860Cellular ComponentRNA polymerase I core factor complexInterproscan

Expression pattern
 Expression trend for OS493_015171-T1 global co-expression network
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