Detailed information of OS493_015907-T1 in Lophelia pertusa

Genomic Location: scaffold_48:1708027...1710429
NR annotation: KAJ7333815.1, ribosomal small subunit export from nucleus [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2CEI4Nucleoporin 88 OS=Danio rerio OX=7955 GN=nup88 PE=1 SV=1
Q8CEC0Nuclear pore complex protein Nup88 OS=Mus musculus OX=10090 GN=Nup88 PE=1 SV=1
O08658Nuclear pore complex protein Nup88 OS=Rattus norvegicus OX=10116 GN=Nup88 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10168Nup88Nuclear pore componentRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037700FamilyNucleoporin NUP88/NUP82Interproscan
IPR019321FamilyNucleoporin Nup88Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13257NUCLEOPORIN NUP84-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000055Biological Processribosomal large subunit export from nucleusInterproscan
GO:0000056Biological Processribosomal small subunit export from nucleusInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan

Expression pattern
 Expression trend for OS493_015907-T1 global co-expression network
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