Detailed information of OS493_016570-T1 in Lophelia pertusa

Genomic Location: scaffold_51:371904...380561
NR annotation: KAJ7379336.1, Lysine-specific demethylase 5A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P29375Lysine-specific demethylase 5A OS=Homo sapiens OX=9606 GN=KDM5A PE=1 SV=3
Q3UXZ9Lysine-specific demethylase 5A OS=Mus musculus OX=10090 GN=Kdm5a PE=1 SV=2
P41229Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02928zf-C5HC2C5HC2 zinc fingerDomainInterproscan
PF21323KDM5_C-helLysine-specific demethylase 5, C-terminal helical domainDomainInterproscan
PF08429PLU-1PLU-1-like proteinFamilyInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347DomainJmjC domainInterproscan
IPR004198DomainZinc finger, C5HC2-typeInterproscan
IPR048615DomainLysine-specific demethylase 5, C-terminal helical domainInterproscan
IPR013637DomainLysine-specific demethylase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10694LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan
GO:0034647Molecular Functionhistone H3K4me/H3K4me2/H3K4me3 demethylase activityInterproscan

Expression pattern
 Expression trend for OS493_016570-T1 global co-expression network
TOP