Detailed information of OS493_016780-T1 in Lophelia pertusa

Genomic Location: scaffold_52:1384498...1445982
NR annotation: KAJ7372855.1, agglutinin-like protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9FN03Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1
Q5GLZ8Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1 SV=1
Q6PAV2Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR051984FamilyAlsin GEFs and Motor Neuron RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46089ALSIN HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0043087Biological Processregulation of GTPase activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

Expression pattern
 Expression trend for OS493_016780-T1 global co-expression network
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