Gene detail

Detailed information of OS493_017427-T1 in Lophelia pertusa

Genomic Location: scaffold_55:2342495...2343875
NR annotation: KAJ7391729.1, Gamma-butyrobetaine dioxygenase [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q19000	Probable gamma-butyrobetaine dioxygenase OS=Caenorhabditis elegans OX=6239 GN=gbh-1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02668	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050411	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan
IPR042098	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR003819	Domain	TauD/TfdA-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0045329	Biological Process	carnitine biosynthetic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

Expression pattern