Gene detail

Detailed information of OS493_017633-T1 in Lophelia pertusa

Genomic Location: scaffold_57:323079...340979
NR annotation: KAJ7379135.1, hypothetical protein OS493_017633 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P31651	Sodium- and chloride-dependent betaine transporter OS=Mus musculus OX=10090 GN=Slc6a12 PE=1 SV=1
P48065	Sodium- and chloride-dependent betaine transporter OS=Homo sapiens OX=9606 GN=SLC6A12 PE=1 SV=2
P48056	Sodium- and chloride-dependent betaine transporter OS=Rattus norvegicus OX=10116 GN=Slc6a12 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00209	SNF	Sodium:neurotransmitter symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000175	Family	Sodium:neurotransmitter symporter	Interproscan
IPR037272	Homologous_superfamily	Sodium:neurotransmitter symporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11616	SODIUM/CHLORIDE DEPENDENT TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0035725	Biological Process	sodium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05034	SLC6A1, GAT1; solute carrier family 6 (neurotransmitter transporter, GABA) member 1	-	Transporters	ko02000	deepkoala

Expression pattern