Detailed information of OS493_018079-T1 in Lophelia pertusa

Genomic Location: scaffold_59:227910...234294
NR annotation: KAJ7360095.1, Protein transport protein Sec23A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15436Protein transport protein Sec23A OS=Homo sapiens OX=9606 GN=SEC23A PE=1 SV=2
Q5R9P3Protein transport protein Sec23A OS=Pongo abelii OX=9601 GN=SEC23A PE=2 SV=1
Q01405Protein transport protein Sec23A OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08033Sec23_BSSec23/Sec24 beta-sandwich domainDomainInterproscan
PF00626GelsolinGelsolin repeatDomainInterproscan
PF04815Sec23_helicalSec23/Sec24 helical domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036175Homologous_superfamilySec23/Sec24 helical domain superfamilyInterproscan
IPR012990DomainSec23/Sec24 beta-sandwichInterproscan
IPR007123DomainGelsolin-like domainInterproscan
IPR037550DomainSec23, C-terminalInterproscan
IPR006900DomainSec23/Sec24, helical domainInterproscan
IPR037364FamilyProtein transport protein Sec23Interproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR036180Homologous_superfamilyGelsolin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11141PROTEIN TRANSPORT PROTEIN SEC23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0090114Biological ProcessCOPII-coated vesicle buddingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0090110Biological ProcessCOPII-coated vesicle cargo loadingInterproscan

Expression pattern
 Expression trend for OS493_018079-T1 global co-expression network
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