Detailed information of OS493_018416-T1 in Lophelia pertusa

Genomic Location: scaffold_61:493633...504094
NR annotation: KAJ7391373.1, hypothetical protein OS493_018416 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NRJ7Protocadherin beta-16 OS=Homo sapiens OX=9606 GN=PCDHB16 PE=1 SV=4
Q8VHS2Protein crumbs homolog 1 OS=Mus musculus OX=10090 GN=Crb1 PE=1 SV=3
P82279Protein crumbs homolog 1 OS=Homo sapiens OX=9606 GN=CRB1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12916CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

Expression pattern
 Expression trend for OS493_018416-T1 global co-expression network
TOP